#78 - 'Target: 2006 Prologue'
#79 - 'Target: 2006 - Part 1'
#80 - 'Target 2006 - Part 2'
#81 - 'Target 2006 - Part 3'
#83 - 'Target 2006 - Part 5 - The Devil You Know...'
#85 - 'Target 2006 - Part 7'
#87 - 'Target 2006 - Part 9'
#88 - 'Target 2006 - Epilogue'
#96 - ' Prey! - Part 1'
#97 - 'Prey! - Part 2'
#113 - 'Wanted - Galvatron Dead or Alive - Part 1'
#114 - 'Wanted - Galvatron Dead or Alive - Part 2'
#130 - 'Worlds Apart! part 1'
#131 - 'Worlds Apart! part 2'
#133 - 'Headhunt - Part 1'
#134 - 'Headhunt - Part 2'
#146 - 'The Legacy of Unicron! - Part 1'
#147 - 'The Legacy of Unicron! - Part 2'
#148 - 'The Legacy of Unicron! - Part 3'
#149 - 'The Legacy of Unicron! - Part 4'
#150 - 'The Legacy of Unicron! - Part 5'
#151 - 'The Legacy of Unicron! - Part 6'
#172 - 'Wrecking Havoc - Part 1'
#173 - 'Wrecking Havoc - Part 2'
#180 - 'The Big Broadcast of 2006'
#181 - 'The Big Broadcast of 2006'
#189 - 'Dry Run!'
#199 - 'Time Wars - Part 1'
#200 - 'Time Wars - Part 2'
#202 - 'Time Wars - Part 4'
#203 - 'Time Wars - Part 5'
#204 - 'Time Wars - Part 6'
#205 - 'Time Wars - Part 7'